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/* This file is part of the Gudhi Library. The Gudhi library
* (Geometric Understanding in Higher Dimensions) is a generic C++
* library for computational topology.
*
* Author(s): Vincent Rouvreau
*
* Copyright (C) 2016 Inria
*
* Modification(s):
* - YYYY/MM Author: Description of the modification
*/
#ifndef INCLUDE_EUCLIDEAN_WITNESS_COMPLEX_INTERFACE_H_
#define INCLUDE_EUCLIDEAN_WITNESS_COMPLEX_INTERFACE_H_
#include <gudhi/Simplex_tree.h>
#include <gudhi/Euclidean_witness_complex.h>
#include "Simplex_tree_interface.h"
#include <CGAL/Epick_d.h>
#include <vector>
#include <utility> // std::pair
#include <iostream>
#include <cstddef>
namespace Gudhi {
namespace witness_complex {
class Euclidean_witness_complex_interface {
using Dynamic_kernel = CGAL::Epick_d< CGAL::Dynamic_dimension_tag >;
using Point_d = Dynamic_kernel::Point_d;
typedef typename Simplex_tree<>::Simplex_key Simplex_key;
public:
Euclidean_witness_complex_interface(const std::vector<std::vector<double>>& landmarks,
const std::vector<std::vector<double>>& witnesses) {
landmarks_.reserve(landmarks.size());
for (auto& landmark : landmarks)
landmarks_.emplace_back(landmark.begin(), landmark.end());
witness_complex_ = new Euclidean_witness_complex<Dynamic_kernel>(landmarks_, witnesses);
}
~Euclidean_witness_complex_interface() {
delete witness_complex_;
}
void create_simplex_tree(Gudhi::Simplex_tree<>* simplex_tree, double max_alpha_square, std::size_t limit_dimension) {
witness_complex_->create_complex(*simplex_tree, max_alpha_square, limit_dimension);
simplex_tree->initialize_filtration();
}
void create_simplex_tree(Gudhi::Simplex_tree<>* simplex_tree, double max_alpha_square) {
witness_complex_->create_complex(*simplex_tree, max_alpha_square);
simplex_tree->initialize_filtration();
}
std::vector<double> get_point(unsigned vh) {
std::vector<double> vd;
if (vh < landmarks_.size()) {
Point_d ph = witness_complex_->get_point(vh);
for (auto coord = ph.cartesian_begin(); coord < ph.cartesian_end(); coord++)
vd.push_back(*coord);
}
return vd;
}
private:
std::vector<Point_d> landmarks_;
Euclidean_witness_complex<Dynamic_kernel>* witness_complex_;
};
} // namespace witness_complex
} // namespace Gudhi
#endif // INCLUDE_EUCLIDEAN_WITNESS_COMPLEX_INTERFACE_H_
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