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@@ -1,22 +1,23 @@ -# PHAT (Persistent Homology Algorithm Toolbox), v1.4.1 # +# PHAT (Persistent Homology Algorithm Toolbox), v1.5.0 # Copyright 2013, 2014 IST Austria -## Project Founders: ## +## Project Founders ## Ulrich Bauer, Michael Kerber, Jan Reininghaus -## Contributors: ## +## Contributors ## -Hubert Wagner +Hubert Wagner, Bryn Keller -## Downloads: ## +## Downloads ## +* [PHAT, v1.5.0](https://bitbucket.org/phat-code/phat/get/v1.5.0.zip) * [PHAT, v1.4.1](https://bitbucket.org/phat-code/phat/get/v1.4.1.zip) * [PHAT, v1.3.0](https://drive.google.com/uc?id=0B7Yz6TPEpiGEMGFNQ3FPX3ltelk&export=download) * [PHAT, v1.2.1](https://drive.google.com/uc?id=0B7Yz6TPEpiGENE9KUnhUSFdFQUk&export=download) * [benchmark data](https://drive.google.com/uc?id=0B7Yz6TPEpiGERGZFbjlXaUt1ZWM&export=download) * [benchmark data 2](https://drive.google.com/uc?id=0B7Yz6TPEpiGEWE55X3RuM3JjZ3M&export=download) -## Description: ## +## Description ## This software library contains methods for computing the persistence pairs of a filtered cell complex represented by an ordered boundary matrix with Z<sub>2</sub> coefficients. @@ -95,7 +96,7 @@ pairs.get_pair(...) A simple example that demonstrates this functionality can be found in `src/simple_example.cpp` -## File Formats: ## +## File Formats ## The library supports input and output in ascii and binary format through the methods `[load|save]_[ascii|binary]` in the classes `boundary_matrix` @@ -133,9 +134,14 @@ Supported Platforms: * Visual Studio 2008 and 2012 (2010 untested) * GCC version 4.4. and higher -References: +## Python Bindings ## +We provide bindings for Python 3.x and 2.7.12+, which are installable using `pip`. Please see +the Python-specific README.rst in the `python` folder of this repository for details. + +## References ## 1. H.Edelsbrunner, J.Harer: Computational Topology, An Introduction. American Mathematical Society, 2010, ISBN 0-8218-4925-5 2. V.de Silva, D.Morozov, M.Vejdemo-Johansson: Dualities in persistent (co)homology. Inverse Problems 27, 2011 3. C.Chen, M.Kerber: Persistent Homology Computation With a Twist. 27th European Workshop on Computational Geometry, 2011. -4. U.Bauer, M.Kerber, J.Reininghaus: Clear and Compress: Computing Persistent Homology in Chunks. [http://arxiv.org/pdf/1303.0477.pdf arXiv:1303.0477]
\ No newline at end of file +4. U.Bauer, M.Kerber, J.Reininghaus: Clear and Compress: Computing Persistent Homology in Chunks. [http://arxiv.org/pdf/1303.0477.pdf](arXiv:1303.0477) +5. U.Bauer, M.Kerber, J.Reininghausc, H.Wagner: Phat – Persistent Homology Algorithms Toolbox. Journal of Symbolic Computation 78, 2017, p. 76–90.
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