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authorMario Mulansky <mario.mulansky@gmx.net>2016-10-27 20:27:00 -0700
committerMario Mulansky <mario.mulansky@gmx.net>2016-10-27 20:27:00 -0700
commit7a2a38c7538434fadff26402daea46294a92bc9f (patch)
treeb24ed7c7ec1ac300e5c18ceeb3ec9b4ab938e406
parentc17cc8602414cec883c412008a4300b2c7ac7f80 (diff)
Added SoftwareX reference and Spike-Order note
-rw-r--r--Readme.rst13
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diff --git a/Readme.rst b/Readme.rst
index 542f4b3..d60d154 100644
--- a/Readme.rst
+++ b/Readme.rst
@@ -15,6 +15,13 @@ PySpike provides the same fundamental functionality as the SPIKY_ framework for
All source codes are available on `Github <https://github.com/mariomulansky/PySpike>`_ and are published under the BSD_License_.
+Citing PySpike
+----------------------------
+If you use PySpike in your research, please cite our SoftwareX publication on PySpike:
+ Mario Mulansky, Thomas Kreuz, *PySpike - A Python library for analyzing spike train synchrony*, SoftwareX, (2016), ISSN 2352-7110, http://dx.doi.org/10.1016/j.softx.2016.07.006.
+
+Additionally, depending on the methods you are using you should consider citation one or more of the following articles:
+
.. [#] Kreuz T, Haas JS, Morelli A, Abarbanel HDI, Politi A, *Measuring spike train synchrony.* J Neurosci Methods 165, 151 (2007) `[pdf] <http://wwwold.fi.isc.cnr.it/users/thomas.kreuz/images/Kreuz_JNeurosciMethods_2007_Spike-Train-Synchrony.pdf>`_
.. [#] Kreuz T, Chicharro D, Houghton C, Andrzejak RG, Mormann F, *Monitoring spike train synchrony.* J Neurophysiol 109, 1457 (2013) `[pdf] <http://wwwold.fi.isc.cnr.it/users/thomas.kreuz/images/Kreuz_JNeurophysiol_2013_SPIKE-distance.pdf>`_
@@ -31,6 +38,12 @@ This is a breaking change in the function interfaces.
Hence, programs written for older versions of PySpike (0.1.x) will not run with newer versions.
+Upcoming Functionality
+-------------------------
+
+In an upcoming release, new functionality for analyzing Synfire patterns based on the new measures SPIKE-Order and Spike-Train-Order method will become part of the PySpike library.
+The new measures and algorithms are described in `this preprint <https://arxiv.org/abs/1610.07986>`_.
+
Requirements and Installation
-----------------------------