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authorIgor Gnatenko <i.gnatenko.brain@gmail.com>2015-12-14 01:53:21 +0100
committerIgor Gnatenko <i.gnatenko.brain@gmail.com>2015-12-14 01:53:21 +0100
commit45d4fac7b207bb5ce98f17433a443837fce0455a (patch)
treeb3fb8b503351a5a332608b53ac997fddb51134cc /test/test_distance.py
parent692a5773c85e08a690bc5406147e58c4f10b6628 (diff)
tests: allow to run out-of-tree
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
Diffstat (limited to 'test/test_distance.py')
-rw-r--r--test/test_distance.py14
1 files changed, 8 insertions, 6 deletions
diff --git a/test/test_distance.py b/test/test_distance.py
index d5bce30..d405839 100644
--- a/test/test_distance.py
+++ b/test/test_distance.py
@@ -17,6 +17,8 @@ from numpy.testing import assert_equal, assert_almost_equal, \
import pyspike as spk
from pyspike import SpikeTrain
+import os
+TEST_PATH = os.path.dirname(os.path.realpath(__file__))
def test_isi():
# generate two spike trains:
@@ -275,8 +277,8 @@ def test_multi_spike_sync():
expected, decimal=15)
# multivariate regression test
- spike_trains = spk.load_spike_trains_from_txt("test/SPIKE_Sync_Test.txt",
- edges=[0, 4000])
+ spike_trains = spk.load_spike_trains_from_txt(
+ os.path.join(TEST_PATH, "SPIKE_Sync_Test.txt"), edges=[0, 4000])
# extract all spike times
spike_times = np.array([])
for st in spike_trains:
@@ -352,8 +354,8 @@ def test_regression_spiky():
# multivariate check
- spike_trains = spk.load_spike_trains_from_txt("test/PySpike_testdata.txt",
- (0.0, 4000.0))
+ spike_trains = spk.load_spike_trains_from_txt(
+ os.path.join(TEST_PATH, "PySpike_testdata.txt"), (0.0, 4000.0))
isi_dist = spk.isi_distance_multi(spike_trains)
# get the full precision from SPIKY
assert_almost_equal(isi_dist, 0.17051816816999129656, decimal=15)
@@ -371,8 +373,8 @@ def test_regression_spiky():
def test_multi_variate_subsets():
- spike_trains = spk.load_spike_trains_from_txt("test/PySpike_testdata.txt",
- (0.0, 4000.0))
+ spike_trains = spk.load_spike_trains_from_txt(
+ os.path.join(TEST_PATH, "PySpike_testdata.txt"), (0.0, 4000.0))
sub_set = [1, 3, 5, 7]
spike_trains_sub_set = [spike_trains[i] for i in sub_set]