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2016-03-09Merge pull request #21 from mariomulansky/unified_interface0.5.10.5.0Mario Mulansky
Unified interface
2016-03-09updated examples to use new unified interfaceMario Mulansky
removed all occasions of *multi functions from examples as they are considered deprecated now. Uses unified interface everywhere.
2016-03-09deprecated old multivariate functionsMario Mulansky
with the new interface, the previous functions for computing multivariate profiles and distances are obsolete. This is now noted in the docs.
2016-02-02new generic interface for spike_sync functionsMario Mulansky
Similar to the isi and spike distance functions, also the spike sync functions now support the new generic interface.
2016-01-31generic interface for spike distance/profileMario Mulansky
spike_profile and spike_distance now have a generic interface that allows to compute bi-variate and multi-variate results with the same function.
2016-01-31generalized interface to isi profile and distanceMario Mulansky
isi profile and distance functionc an now compute bi-variate and multi-variate results. Therefore, it can be called with different "overloads".
2016-01-28+numeric test of profilesMario Mulansky
2015-12-22add numeric tests to travisMario Mulansky
2015-12-22moved extensive random spike test to test/numericMario Mulansky
2015-12-22changed edge correction for single spikesMario Mulansky
Spike trains with single spikes now only get auxiliary spikes at the edges for the SPIKE distance instead of real spikes before.
2015-12-19python3 print function in new regression testMario Mulansky
2015-12-18travis bugfixMario Mulansky
2015-12-18travis bugfixMario Mulansky
2015-12-18travis bugfixMario Mulansky
2015-12-18add scipy to travisMario Mulansky
2015-12-18removed print outs from python backendMario Mulansky
2015-12-18bugfix for edge correctionMario Mulansky
fixed bug within new edge correction (auxiliary spike was ignored in some cases) added regression test with 10000 random spike train sets
2015-12-14Merge pull request #20 from mariomulansky/developMario Mulansky
Develop merge for version 0.4
2015-12-14removed directionality from __init__ and setup.pyMario Mulansky
2015-12-14update version strings and Changelog0.4.0Mario Mulansky
2015-12-14remove directionality from developMario Mulansky
directionality development happens in separate branch.
2015-12-14python backend updated for new edge correctionMario Mulansky
Eero's improved edge correction now also implemented in the python backend.
2015-12-14Merge branch 'develop' of github.com:mariomulansky/PySpike into developMario Mulansky
2015-12-14improved edge correction for spike distanceMario Mulansky
Improvement following Eeros suggestions to use auxiliary spike at the edges consistently with the corresponding corrected ISI intervals.
2015-12-14Merge pull request #19 from ignatenkobrain/py3_developMario Mulansky
Python 3 support
2015-12-14contributors: add myselfIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14tests: allow to run out-of-treeIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14stop using package_dataIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14add metadata and testing under py3Igor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14py3: divisionIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14py3: xrange() -> range()Igor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14py3: absolute_importIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-08-17add python backend for directionalityMario Mulansky
2015-08-17major renaming of spike train order functionsMario Mulansky
2015-08-17first unit tests for directionalityMario Mulansky
2015-08-17fix for #14Mario Mulansky
test case and fix for Issue #14. Spike-Sync function now correctly deal with empty intervals as well.
2015-08-17fix #15Mario Mulansky
add test case and fix for Issue #15 closes #15
2015-08-13more directionality functionsMario Mulansky
+ spike delay asymmetry profile + spike delay dual profile
2015-08-12new spike delay asymmetry measuresMario Mulansky
added first version of spike delay asymmetry functions. still incomplete and untested.
2015-08-11add regression #11 test caseMario Mulansky
2015-08-11Merge branch 'ImmanuelSamuel-master' into developMario Mulansky
fixes #11
2015-08-10Added more //ImmanuelSamuel
2015-08-10Used // instead of type conversionImmanuelSamuel
2015-08-10Syntax correctionImmanuelSamuel
2015-08-10Indices for matrix slicing needs to be integersImmanuelSamuel
Dividing the indices by 2 gives a float which cannot be used for slicing the matrix. Changed the type of the indices to integer to ensure that matrix slicing does not return error.
2015-07-07add disable_backend_warning propertyMario Mulansky
Users can now disable the warning messages produced when the cython backend is not available by writing spk.disable_backend_warning = True in the beginning
2015-07-07better spike train plot (scatter) in plot.pyMario Mulansky
2015-06-24fixed typoMario Mulansky
2015-06-12update example to use new SpikeTrain capabilityMario Mulansky
Make use of __getitem__ and __len__ of SpikeTrains in some examples.
2015-06-12implement __getitem__ and __len__ for SpikeTrainMario Mulansky
This allows to use SpikeTrain objects to be used in many applications as if they were arrays with spike times.
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