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2021-12-30New upstream versiondebian/0.7.0-1debian/sidGard Spreemann
2021-12-30Merge tag '0.7.0' into debian/sidGard Spreemann
2021-12-29Add changelog note to Readme, remvove .travis.ymlupstream/latestMario Mulansky
2021-12-29Bump version to 0.7Mario Mulansky
2021-12-29Set language level 3 in cython filesMario Mulansky
2021-12-29Add cython to test matrixMario Mulansky
2021-12-29Call python -m pytest in test workflowMario Mulansky
2021-12-29Remove --inplace from workflow installMario Mulansky
2021-12-29Use pytest in CI instead of nosetestsMario Mulansky
2021-12-29Add setup.py command to test workflowMario Mulansky
2021-12-29Fix typo in workflowMario Mulansky
2021-12-29Create python-package.ymlMario Mulansky
Switch from travis to GitHub actions
2021-12-29Merge branch 'master' into developMario Mulansky
2021-12-29Fix readme links with updated links (#54)Xhuliano Brace
2021-12-29Python 3.10 compatibility fix (#53)gspr
Importing Sequence et al. from collections has been deprecated since Python 3.7.
2021-12-29Use assert_allclose instead of assert_equal in tests to allow for different ↵gspr
floating point behavior on different architectures or optimization levels. (#49)
2021-11-27Ensure dh_numpy3 is called for NumPy ABI generationGard Spreemann
2021-11-21Add patch for Python 3.10 compatibilityGard Spreemann
2021-10-15Changelog for releaseGard Spreemann
2021-10-15TypoGard Spreemann
2021-10-15Standards-versionGard Spreemann
2021-10-15Fix broken watch fileGard Spreemann
2021-01-23Extend copyright rangesdebian/0.6.0-3Gard Spreemann
2021-01-23ChangelogGard Spreemann
2021-01-23Git to SalsaGard Spreemann
2021-01-23Drop journal reference from descriptionGard Spreemann
It's in the new upstream metadata file now.
2021-01-23Start upstream metadata fileGard Spreemann
2021-01-23DH 13 (new style)Gard Spreemann
2021-01-23Standards-versionGard Spreemann
2020-03-07Add patch to allow floating point behavior differences in tests.debian/0.6.0-2Gard Spreemann
2020-02-06Remove multi-arch support. There'll probably be byte-compiled files.new-queue/20200206debian/0.6.0-1Gard Spreemann
2020-02-06Update changelog.Gard Spreemann
2020-02-06Standards-version.Gard Spreemann
2019-07-22Allow tests to use stderr.mentors/20190722Gard Spreemann
2019-07-22Update changelog.Gard Spreemann
2019-07-22Initial autopkgtest support.Gard Spreemann
2019-07-22Simplify watch file.Gard Spreemann
2019-07-17Build-dep on nose for testing.Gard Spreemann
2019-07-17Watch file.Gard Spreemann
2019-07-17Multi-arch same.Gard Spreemann
2019-07-17Build-depend on cython.Gard Spreemann
2019-07-17Merge tag '0.6.0' into debian/sidGard Spreemann
2019-07-17Initial commit of Debian packaging.Gard Spreemann
2018-09-20Add missing line in tutorialMario Mulansky
2018-09-20Spike Order support (#39)0.6.0Mario Mulansky
* reorganized directionality module * further refactoring of directionality * completed python directionality backend * added SPIKE-Sync based filtering new function filter_by_spike_sync removes spikes that have a multi-variate Spike Sync value below some threshold not yet fully tested, python backend missing. * spike sync filtering, cython sim ann Added function for filtering out events based on a threshold for the spike sync values. Usefull for focusing on synchronous events during directionality analysis. Also added cython version of simulated annealing for performance. * added coincidence single profile to python backend missing function in python backend added, identified and fixed a bug in the implementation as well * updated test case to new spike sync behavior * python3 fixes * another python3 fix * reorganized directionality module * further refactoring of directionality * completed python directionality backend * added SPIKE-Sync based filtering new function filter_by_spike_sync removes spikes that have a multi-variate Spike Sync value below some threshold not yet fully tested, python backend missing. * spike sync filtering, cython sim ann Added function for filtering out events based on a threshold for the spike sync values. Usefull for focusing on synchronous events during directionality analysis. Also added cython version of simulated annealing for performance. * added coincidence single profile to python backend missing function in python backend added, identified and fixed a bug in the implementation as well * updated test case to new spike sync behavior * python3 fixes * another python3 fix * Fix absolute imports in directionality measures * remove commented code * Add directionality to docs, bump version * Clean up directionality module, add doxy. * Remove debug print from tests * Fix bug in calling Python backend * Fix incorrect integrals in PieceWiseConstFunc (#36) * Add (some currently failing) tests for PieceWiseConstFunc.integral * Fix implementation of PieceWiseConstFunc.integral Just by adding a special condition for when we are only taking an integral "between" two edges of a PieceWiseConstFunc All tests now pass. Fixes #33. * Add PieceWiseConstFunc.integral tests for ValueError * Add testing bounds of integral * Raise ValueError in function implementation * Fix incorrect integrals in PieceWiseLinFunc (#38) Integrals of piece-wise linear functions were incorrect if the requested interval lies completely between two support points. This has been fixed, and a unit test exercising this behavior was added. Fixes #38 * Add Spike Order example and Tutorial section Adds an example computing spike order profile and the optimal spike train order. Also adds a section on spike train order to the tutorial.
2018-09-20Add Spike Order example and Tutorial sectionMario Mulansky
Adds an example computing spike order profile and the optimal spike train order. Also adds a section on spike train order to the tutorial.
2018-09-19Fix incorrect integrals in PieceWiseLinFunc (#38)Mario Mulansky
Integrals of piece-wise linear functions were incorrect if the requested interval lies completely between two support points. This has been fixed, and a unit test exercising this behavior was added. Fixes #38
2018-07-21Fix incorrect integrals in PieceWiseConstFunc (#36)Jonathan Jouty
* Add (some currently failing) tests for PieceWiseConstFunc.integral * Fix implementation of PieceWiseConstFunc.integral Just by adding a special condition for when we are only taking an integral "between" two edges of a PieceWiseConstFunc All tests now pass. Fixes #33. * Add PieceWiseConstFunc.integral tests for ValueError * Add testing bounds of integral * Raise ValueError in function implementation
2018-07-21Fix bug in calling Python backendMario Mulansky
2018-07-15Remove debug print from testsMario Mulansky