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author | glisse <glisse@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2016-12-12 05:43:06 +0000 |
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committer | glisse <glisse@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2016-12-12 05:43:06 +0000 |
commit | ad6a64ad5a4f4121410250021eda0904eb9c718c (patch) | |
tree | fdad2e783a79b388cde1826e3b344d8977d1183a /src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp | |
parent | f9a32a464156dd61b444f0e70c8342642363e8ea (diff) | |
parent | f0e5330a88f9e89a887769ab79f6db6dd4e1c35a (diff) |
Merge from trunk.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/qt5@1848 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: c8e1376894207c8c08896f750f71c115e07f6d95
Diffstat (limited to 'src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp')
-rw-r--r-- | src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp | 45 |
1 files changed, 44 insertions, 1 deletions
diff --git a/src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp b/src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp index 194b3e74..6efd749e 100644 --- a/src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp +++ b/src/Persistent_cohomology/test/persistent_cohomology_unit_test.cpp @@ -4,6 +4,7 @@ #include <utility> // std::pair, std::make_pair #include <cmath> // float comparison #include <limits> +#include <cstdint> // for std::uint8_t #define BOOST_TEST_DYN_LINK #define BOOST_TEST_MODULE "persistent_cohomology" @@ -43,7 +44,7 @@ std::string test_rips_persistence(int coefficient, int min_persistence) { st.initialize_filtration(); // Compute the persistence diagram of the complex - persistent_cohomology::Persistent_cohomology<Simplex_tree<>, Field_Zp> pcoh(st); + Persistent_cohomology<Simplex_tree<>, Field_Zp> pcoh(st); pcoh.init_coefficients( coefficient ); // initializes the coefficient field for homology // Check infinite rips @@ -172,3 +173,45 @@ BOOST_AUTO_TEST_CASE( rips_persistent_cohomology_single_field_dim_5 ) // std::string str_rips_persistence = test_rips_persistence(6, 0); // TODO(VR): division by zero // std::string str_rips_persistence = test_rips_persistence(0, 0); + +/** SimplexTree minimal options to test the limits. + * + * Maximum number of simplices to compute persistence is <CODE>std::numeric_limits<std::uint8_t>::max()<\CODE> = 256.*/ +struct MiniSTOptions { + typedef linear_indexing_tag Indexing_tag; + typedef short Vertex_handle; + typedef double Filtration_value; + // Maximum number of simplices to compute persistence is 2^8 - 1 = 255. One is reserved for null_key + typedef std::uint8_t Simplex_key; + static const bool store_key = true; + static const bool store_filtration = false; + static const bool contiguous_vertices = false; +}; + +using Mini_simplex_tree = Gudhi::Simplex_tree<MiniSTOptions>; +using Mini_st_persistence = + Gudhi::persistent_cohomology::Persistent_cohomology<Mini_simplex_tree, Gudhi::persistent_cohomology::Field_Zp>; + +BOOST_AUTO_TEST_CASE( persistence_constructor_exception ) +{ + Mini_simplex_tree st; + + // To make number of simplices = 255 + const short simplex_0[] = {0, 1, 2, 3, 4, 5, 6, 7}; + st.insert_simplex_and_subfaces(simplex_0); + // FIXME: Remove this line + st.set_dimension(8); + + // Sort the simplices in the order of the filtration + st.initialize_filtration(); + + BOOST_CHECK(st.num_simplices() <= std::numeric_limits<MiniSTOptions::Simplex_key>::max()); + // Class for homology computation + BOOST_CHECK_NO_THROW(Mini_st_persistence pcoh(st)); + + st.insert_simplex({8}); + BOOST_CHECK(st.num_simplices() > std::numeric_limits<MiniSTOptions::Simplex_key>::max()); + // Class for homology computation + BOOST_CHECK_THROW(Mini_st_persistence pcoh2(st), std::out_of_range); + +} |