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authorvrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2016-10-20 10:04:05 +0000
committervrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2016-10-20 10:04:05 +0000
commit8d656e33138ef8b3a7d86a7375c92646efc29511 (patch)
tree3711227c4c1b2a6e9f25dda1db8dafb8365063a0 /src/cython/doc/persistence_graphical_tools_user.rst
parent355dc2a0ae73f243fc0aa8d7c797509d8ba5e6b4 (diff)
parent30e538a98919004e36b3b382017884486919cb6e (diff)
Merge last trunk modification
Fix doc issue Still doc issue git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1739 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0a99345f06e93a3525691699a6fe1505979e8e8e
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+=======================================
+Persistence graphical tools user manual
+=======================================
+Definition
+----------
+.. include:: persistence_graphical_tools_sum.rst
+
+
+Show palette values
+-------------------
+
+This function is useful to show the color palette values of dimension:
+
+
+.. testcode::
+
+ import gudhi
+ gudhi.show_palette_values(alpha=1.0)
+
+Show persistence as a barcode
+-----------------------------
+
+This function can display the persistence result as a barcode:
+
+.. testcode::
+
+ import gudhi
+
+ periodic_cc = gudhi.PeriodicCubicalComplex(perseus_file='3d_torus.txt')
+ diag = periodic_cc.persistence()
+ gudhi.barcode_persistence(diag)
+
+
+Show persistence as a diagram
+-----------------------------
+
+This function can display the persistence result as a diagram:
+
+.. testcode::
+
+ import gudhi
+
+ alpha_complex = gudhi.AlphaComplex(off_file='tore3D_300.off')
+ alpha_complex.initialize_filtration()
+ diag = alpha_complex.persistence()
+ gudhi.diagram_persistence(diag)