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| author | mcarrier <mcarrier@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2018-05-25 09:27:36 +0000 |
|---|---|---|
| committer | mcarrier <mcarrier@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2018-05-25 09:27:36 +0000 |
| commit | 52b0f4082174888c190a005fd55232e3c38b99d4 (patch) | |
| tree | a38ff0166e42bafcc81f00f6f0e9e48d2ce0b29a /src/cython/example/alpha_rips_persistence_bottleneck_distance.py | |
| parent | 78335c71e46bd3b77d1595edef63cedbe6cf006c (diff) | |
| parent | 979de853d97225b2b5466ec0a896a06dd08325e9 (diff) | |
small modif to avoid assert on compute_PD()
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3459 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: b0e73b4e1e77743419b06d142467ebfceacf83cf
Diffstat (limited to 'src/cython/example/alpha_rips_persistence_bottleneck_distance.py')
| -rwxr-xr-x | src/cython/example/alpha_rips_persistence_bottleneck_distance.py | 9 |
1 files changed, 5 insertions, 4 deletions
diff --git a/src/cython/example/alpha_rips_persistence_bottleneck_distance.py b/src/cython/example/alpha_rips_persistence_bottleneck_distance.py index ab5fc1e9..b51fa7a8 100755 --- a/src/cython/example/alpha_rips_persistence_bottleneck_distance.py +++ b/src/cython/example/alpha_rips_persistence_bottleneck_distance.py @@ -10,7 +10,7 @@ import math Author(s): Vincent Rouvreau - Copyright (C) 2016 INRIA + Copyright (C) 2016 Inria This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by @@ -27,7 +27,7 @@ import math """ __author__ = "Vincent Rouvreau" -__copyright__ = "Copyright (C) 2016 INRIA" +__copyright__ = "Copyright (C) 2016 Inria" __license__ = "GPL v3" parser = argparse.ArgumentParser(description='AlphaComplex and RipsComplex ' @@ -45,13 +45,14 @@ args = parser.parse_args() with open(args.file, 'r') as f: first_line = f.readline() if (first_line == 'OFF\n') or (first_line == 'nOFF\n'): + point_cloud = gudhi.read_off(off_file=args.file) print("#####################################################################") print("RipsComplex creation from points read in a OFF file") message = "RipsComplex with max_edge_length=" + repr(args.threshold) print(message) - rips_complex = gudhi.RipsComplex(off_file=args.file, + rips_complex = gudhi.RipsComplex(points=point_cloud, max_edge_length=args.threshold) rips_stree = rips_complex.create_simplex_tree(max_dimension=args.max_dimension) @@ -67,7 +68,7 @@ with open(args.file, 'r') as f: message = "AlphaComplex with max_edge_length=" + repr(args.threshold) print(message) - alpha_complex = gudhi.AlphaComplex(off_file=args.file) + alpha_complex = gudhi.AlphaComplex(points=point_cloud) alpha_stree = alpha_complex.create_simplex_tree(max_alpha_square=(args.threshold * args.threshold)) message = "Number of simplices=" + repr(alpha_stree.num_simplices()) |