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authorMarc Glisse <marc.glisse@inria.fr>2020-05-09 10:37:00 +0200
committerMarc Glisse <marc.glisse@inria.fr>2020-05-09 10:37:00 +0200
commit894462a364dd5d4bf4a5250c0c3c075c561fb174 (patch)
tree02f5faedfe1e80335f3414fd09c0c18a45854129 /src/python/setup.py.in
parent5ad8f41550d94988214fbf128a179d918635c3cf (diff)
parentb91fa852b141a5f8b4a4915849b35fbdb6993772 (diff)
Merge remote-tracking branch 'origin/master' into nogil1
Diffstat (limited to 'src/python/setup.py.in')
-rw-r--r--src/python/setup.py.in29
1 files changed, 18 insertions, 11 deletions
diff --git a/src/python/setup.py.in b/src/python/setup.py.in
index f968bd59..b9f4e3f0 100644
--- a/src/python/setup.py.in
+++ b/src/python/setup.py.in
@@ -18,7 +18,8 @@ __author__ = "Vincent Rouvreau"
__copyright__ = "Copyright (C) 2016 Inria"
__license__ = "MIT"
-modules = [@GUDHI_PYTHON_MODULES_TO_COMPILE@]
+cython_modules = [@GUDHI_CYTHON_MODULES@]
+pybind11_modules = [@GUDHI_PYBIND11_MODULES@]
source_dir='@CMAKE_CURRENT_SOURCE_DIR@/gudhi/'
extra_compile_args=[@GUDHI_PYTHON_EXTRA_COMPILE_ARGS@]
@@ -30,7 +31,7 @@ runtime_library_dirs=[@GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS@]
# Create ext_modules list from module list
ext_modules = []
-for module in modules:
+for module in cython_modules:
ext_modules.append(Extension(
'gudhi.' + module,
sources = [source_dir + module + '.pyx',],
@@ -45,15 +46,21 @@ for module in modules:
ext_modules = cythonize(ext_modules)
-ext_modules.append(Extension(
- 'gudhi.hera',
- sources = [source_dir + 'hera.cc'],
- language = 'c++',
- include_dirs = include_dirs +
- ['@HERA_WASSERSTEIN_INCLUDE_DIR@',
- pybind11.get_include(False), pybind11.get_include(True)],
- extra_compile_args=extra_compile_args + [@GUDHI_PYBIND11_EXTRA_COMPILE_ARGS@],
- ))
+for module in pybind11_modules:
+ my_include_dirs = include_dirs + [pybind11.get_include(False), pybind11.get_include(True)]
+ if module == 'hera':
+ my_include_dirs = ['@HERA_WASSERSTEIN_INCLUDE_DIR@'] + my_include_dirs
+ ext_modules.append(Extension(
+ 'gudhi.' + module,
+ sources = [source_dir + module + '.cc'],
+ language = 'c++',
+ include_dirs = my_include_dirs,
+ extra_compile_args=extra_compile_args + [@GUDHI_PYBIND11_EXTRA_COMPILE_ARGS@],
+ extra_link_args=extra_link_args,
+ libraries=libraries,
+ library_dirs=library_dirs,
+ runtime_library_dirs=runtime_library_dirs,
+ ))
setup(
name = 'gudhi',