summaryrefslogtreecommitdiff
path: root/src/Bottleneck/include/gudhi/Planar_neighbors_finder.h
diff options
context:
space:
mode:
Diffstat (limited to 'src/Bottleneck/include/gudhi/Planar_neighbors_finder.h')
-rw-r--r--src/Bottleneck/include/gudhi/Planar_neighbors_finder.h119
1 files changed, 0 insertions, 119 deletions
diff --git a/src/Bottleneck/include/gudhi/Planar_neighbors_finder.h b/src/Bottleneck/include/gudhi/Planar_neighbors_finder.h
deleted file mode 100644
index 4af672e4..00000000
--- a/src/Bottleneck/include/gudhi/Planar_neighbors_finder.h
+++ /dev/null
@@ -1,119 +0,0 @@
-/* This file is part of the Gudhi Library. The Gudhi library
- * (Geometric Understanding in Higher Dimensions) is a generic C++
- * library for computational topology.
- *
- * Author(s): Francois Godi
- *
- * Copyright (C) 2015 INRIA Saclay (France)
- *
- * This program is free software: you can redistribute it and/or modify
- * it under the terms of the GNU General Public License as published by
- * the Free Software Foundation, either version 3 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program. If not, see <http://www.gnu.org/licenses/>.
- */
-
-#ifndef SRC_BOTTLENECK_INCLUDE_GUDHI_PLANAR_NEIGHBORS_FINDER_H_
-#define SRC_BOTTLENECK_INCLUDE_GUDHI_PLANAR_NEIGHBORS_FINDER_H_
-
-#include <list>
-#include <iostream>
-#include <set>
-
-#include "Persistence_diagrams_graph.h"
-
-namespace Gudhi {
-
-namespace bottleneck {
-
-// Planar_neighbors_finder is a data structure used to find if a query point from U has planar neighbors in V with the
-// planar distance.
-// V's points have to be added manually using their index. A neighbor returned is automatically removed but we can also
-// remove points manually using their index.
-
-class Abstract_planar_neighbors_finder {
- public:
- Abstract_planar_neighbors_finder(const Persistence_diagrams_graph& g, double r);
- virtual ~Abstract_planar_neighbors_finder() = 0;
- virtual void add(int v_point_index) = 0;
- virtual void remove(int v_point_index) = 0;
- virtual bool contains(int v_point_index) const = 0;
- virtual int pull_near(int u_point_index) = 0;
- virtual std::list<int>* pull_all_near(int u_point_index);
-
- protected:
- const Persistence_diagrams_graph& g;
- const double r;
-};
-
-
-// Naive_pnf is a nave implementation of Abstract_planar_neighbors_finder
-
-class Naive_pnf : public Abstract_planar_neighbors_finder {
- public:
- Naive_pnf(const Persistence_diagrams_graph& g, double r);
- void add(int v_point_index);
- void remove(int v_point_index);
- bool contains(int v_point_index) const;
- int pull_near(int u_point_index);
-
- private:
- std::set<int> candidates;
-};
-
-
-// Planar_neighbors_finder is the used Abstract_planar_neighbors_finder's implementation
-typedef Naive_pnf Planar_neighbors_finder;
-
-Abstract_planar_neighbors_finder::Abstract_planar_neighbors_finder(const Persistence_diagrams_graph& g, double r) :
- g(g), r(r) { }
-
-inline Abstract_planar_neighbors_finder::~Abstract_planar_neighbors_finder() { }
-
-inline std::list<int>* Abstract_planar_neighbors_finder::pull_all_near(int u_point_index) {
- std::list<int>* all_pull = new std::list<int>();
- int last_pull = pull_near(u_point_index);
- while (last_pull != null_point_index()) {
- all_pull->emplace_back(last_pull);
- last_pull = pull_near(u_point_index);
- }
- return all_pull;
-}
-
-Naive_pnf::Naive_pnf(const Persistence_diagrams_graph& g, double r) :
- Abstract_planar_neighbors_finder(g, r), candidates() { }
-
-inline void Naive_pnf::add(int v_point_index) {
- candidates.emplace(v_point_index);
-}
-
-inline void Naive_pnf::remove(int v_point_index) {
- candidates.erase(v_point_index);
-}
-
-inline bool Naive_pnf::contains(int v_point_index) const {
- return (candidates.count(v_point_index) > 0);
-}
-
-inline int Naive_pnf::pull_near(int u_point_index) {
- for (auto it = candidates.begin(); it != candidates.end(); ++it)
- if (g.distance(u_point_index, *it) <= r) {
- int tmp = *it;
- candidates.erase(it);
- return tmp;
- }
- return null_point_index();
-}
-
-} // namespace bottleneck
-
-} // namespace Gudhi
-
-#endif // SRC_BOTTLENECK_INCLUDE_GUDHI_PLANAR_NEIGHBORS_FINDER_H_