diff options
Diffstat (limited to 'src/cython/example/alpha_complex_diagram_persistence_from_off_file_example.py')
| -rwxr-xr-x | src/cython/example/alpha_complex_diagram_persistence_from_off_file_example.py | 15 |
1 files changed, 11 insertions, 4 deletions
diff --git a/src/cython/example/alpha_complex_diagram_persistence_from_off_file_example.py b/src/cython/example/alpha_complex_diagram_persistence_from_off_file_example.py index 8e534061..d74eba57 100755 --- a/src/cython/example/alpha_complex_diagram_persistence_from_off_file_example.py +++ b/src/cython/example/alpha_complex_diagram_persistence_from_off_file_example.py @@ -33,11 +33,12 @@ parser = argparse.ArgumentParser(description='AlphaComplex creation from ' 'points read in a OFF file.', epilog='Example: ' 'example/alpha_complex_diagram_persistence_from_off_file_example.py ' - '../data/points/tore3D_1307.off ' + '-f ../data/points/tore3D_300.off -a 0.6' '- Constructs a alpha complex with the ' 'points from the given file. File format ' 'is X1, X2, ..., Xn') parser.add_argument("-f", "--file", type=str, required=True) +parser.add_argument("-a", "--max_alpha_square", type=float, default=0.5) parser.add_argument('--no-diagram', default=False, action='store_true' , help='Flag for not to display the diagrams') args = parser.parse_args() @@ -45,12 +46,18 @@ args = parser.parse_args() with open(args.file, 'r') as f: first_line = f.readline() if (first_line == 'OFF\n') or (first_line == 'nOFF\n'): - print("#####################################################################") print("AlphaComplex creation from points read in a OFF file") - alpha_complex = gudhi.AlphaComplex(off_file=args.file, max_alpha_square=0.5) + + message = "AlphaComplex with max_edge_length=" + repr(args.max_alpha_square) + print(message) + + alpha_complex = gudhi.AlphaComplex(off_file=args.file, max_alpha_square=args.max_alpha_square) - diag = alpha_complex.persistence(homology_coeff_field=2, min_persistence=0.1) + message = "Number of simplices=" + repr(alpha_complex.num_simplices()) + print(message) + + diag = alpha_complex.persistence() print("betti_numbers()=") print(alpha_complex.betti_numbers()) |