diff options
Diffstat (limited to 'src/cython')
| -rwxr-xr-x | src/cython/cython/persistence_graphical_tools.py | 14 | ||||
| -rw-r--r-- | src/cython/doc/persistence_graphical_tools_user.rst | 2 |
2 files changed, 8 insertions, 8 deletions
diff --git a/src/cython/cython/persistence_graphical_tools.py b/src/cython/cython/persistence_graphical_tools.py index 4c8467bd..96b579bd 100755 --- a/src/cython/cython/persistence_graphical_tools.py +++ b/src/cython/cython/persistence_graphical_tools.py @@ -250,10 +250,10 @@ try: (default), 'scott' is used. See scipy.stats.gaussian_kde documentation for more details. :type bw_method: str, scalar or callable, optional. - :param max_plots: maximal number of points to display. Selected points - are those with the longest life time. Set it to 0 to see all, - default value is 1000. - :type max_plots: int. + :param max_intervals: maximal number of intervals to display. + Selected points are those with the longest life time. Set it + to 0 to see all. Default value is 1000. + :type max_intervals: int. :param dimension: the dimension to be selected in the intervals (default is None to mix all dimensions). :type dimension: int. @@ -283,11 +283,11 @@ try: else: persistence_dim = persistence - if max_plots > 0 and max_plots < len(persistence_dim): - # Sort by life time, then takes only the max_plots elements + if max_intervals > 0 and max_intervals < len(persistence_dim): + # Sort by life time, then takes only the max_intervals elements persistence_dim = sorted(persistence_dim, key=lambda life_time: life_time[1][1]-life_time[1][0], - reverse=True)[:max_plots] + reverse=True)[:max_intervals] # Set as numpy array birth and death (remove undefined values - inf and NaN) birth = np.asarray([(interval[1][0]) for interval in persistence_dim if (math.isfinite(interval[1][1]) and math.isfinite(interval[1][0]))]) diff --git a/src/cython/doc/persistence_graphical_tools_user.rst b/src/cython/doc/persistence_graphical_tools_user.rst index 0047f9c8..fda086c3 100644 --- a/src/cython/doc/persistence_graphical_tools_user.rst +++ b/src/cython/doc/persistence_graphical_tools_user.rst @@ -60,5 +60,5 @@ If you want more information on a specific dimension, for instance: persistence_file=gudhi.__root_source_dir__ + \ '/data/persistence_diagram/rips_on_tore3D_1307.pers' plt = gudhi.plot_persistence_density(persistence_file=persistence_file, - max_plots=0, dimension=1, legend=True) + max_intervals=0, dimension=1, legend=True) plt.show() |