summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorUlrich Bauer <mail@ulrich-bauer.org>2019-07-13 18:40:15 +0200
committerUlrich Bauer <mail@ulrich-bauer.org>2019-07-13 18:40:15 +0200
commit4b1db3c6b2cbe0145f038436d70ffbbec56f820d (patch)
treed5ff15df9744d9e8505c28593ff1af557ee03db5
parentac9b1eeb75da3a55c72d73a35cbe18195c92b881 (diff)
more examples for optimization benchmarks
-rw-r--r--benchmarks/Dockerfile6
1 files changed, 6 insertions, 0 deletions
diff --git a/benchmarks/Dockerfile b/benchmarks/Dockerfile
index bd7c63f..2a56c75 100644
--- a/benchmarks/Dockerfile
+++ b/benchmarks/Dockerfile
@@ -98,6 +98,8 @@ RUN time -v -o fractal-r.ripser-no-emergent.txt ripser fractal_9_5_2_random_e
RUN time -v -o dragon-2.ripser-no-emergent.txt ripser dragon_vrip.ply.txt_2000_.txt --format point-cloud --dim 1
# RUN time -v -o genome.ripser-no-emergent.txt ripser human_gene_distmat.txt --dim 1
RUN time -v -o o3_1024.ripser-no-emergent.txt ripser o3_1024.txt --format point-cloud --dim 3 --threshold 1.8 --ratio 2
+RUN time -v -o o3_4096.ripser-no-emergent.txt ripser o3_4096.txt --format point-cloud --dim 3 --threshold 1.4 --ratio 2
+RUN time -v -o clifford_torus_50000.ripser-no-emergent.txt ripser clifford_torus_50000.points.txt --format point-cloud --dim 2 --threshold .15 --ratio 2
FROM benchmark-ripser as benchmark-ripser-store-reduced
@@ -113,6 +115,8 @@ RUN time -v -o fractal-r.ripser-store-reduced.txt ripser fractal_9_5_2_random
RUN time -v -o dragon-2.ripser-store-reduced.txt ripser dragon_vrip.ply.txt_2000_.txt --format point-cloud --dim 1
# RUN time -v -o genome.ripser-store-reduced.txt ripser human_gene_distmat.txt --dim 1
RUN time -v -o o3_1024.ripser-store-reduced.txt ripser o3_1024.txt --format point-cloud --dim 3 --threshold 1.8 --ratio 2
+RUN time -v -o o3_4096.ripser-store-reduced.txt ripser o3_4096.txt --format point-cloud --dim 3 --threshold 1.4 --ratio 2
+# RUN time -v -o clifford_torus_50000.ripser-store-reduced.txt ripser clifford_torus_50000.points.txt --format point-cloud --dim 2 --threshold .15 --ratio 2
FROM benchmark-ripser as benchmark-ripser-use-reduced
@@ -128,6 +132,8 @@ RUN time -v -o fractal-r.ripser-use-reduced.txt ripser fractal_9_5_2_random_e
RUN time -v -o dragon-2.ripser-use-reduced.txt ripser dragon_vrip.ply.txt_2000_.txt --format point-cloud --dim 1
# RUN time -v -o genome.ripser-use-reduced.txt ripser human_gene_distmat.txt --dim 1
RUN time -v -o o3_1024.ripser-use-reduced.txt ripser o3_1024.txt --format point-cloud --dim 3 --threshold 1.8 --ratio 2
+RUN time -v -o o3_4096.ripser-use-reduced.txt ripser o3_4096.txt --format point-cloud --dim 3 --threshold 1.4 --ratio 2
+# RUN time -v -o clifford_torus_50000.ripser-use-reduced.txt ripser clifford_torus_50000.points.txt --format point-cloud --dim 2 --threshold .15 --ratio 2
FROM benchmark-setup as benchmark-gudhi