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2020-03-08Use assert_allclose instead of assert_equal in tests to allow for different ↵gspr/issue-44Gard Spreemann
floating point behavior on different architectures or optimization levels.
2018-09-20Add missing line in tutorialMario Mulansky
2018-09-20Add Spike Order example and Tutorial sectionMario Mulansky
Adds an example computing spike order profile and the optimal spike train order. Also adds a section on spike train order to the tutorial.
2018-09-19Fix incorrect integrals in PieceWiseLinFunc (#38)Mario Mulansky
Integrals of piece-wise linear functions were incorrect if the requested interval lies completely between two support points. This has been fixed, and a unit test exercising this behavior was added. Fixes #38
2018-07-21Fix incorrect integrals in PieceWiseConstFunc (#36)Jonathan Jouty
* Add (some currently failing) tests for PieceWiseConstFunc.integral * Fix implementation of PieceWiseConstFunc.integral Just by adding a special condition for when we are only taking an integral "between" two edges of a PieceWiseConstFunc All tests now pass. Fixes #33. * Add PieceWiseConstFunc.integral tests for ValueError * Add testing bounds of integral * Raise ValueError in function implementation
2018-07-21Fix bug in calling Python backendMario Mulansky
2018-07-15Remove debug print from testsMario Mulansky
2018-07-15Clean up directionality module, add doxy.Mario Mulansky
2018-06-09Add directionality to docs, bump versionMario Mulansky
2018-06-09Merge branch 'new_directionality' into developMario Mulansky
2018-06-09Merge branch 'develop' of github.com:mariomulansky/PySpike into developMario Mulansky
2018-06-09remove commented codeMario Mulansky
2018-06-02Merge branch 'new_directionality' of github.com:mariomulansky/PySpike into ↵Mario Mulansky
new_directionality
2018-06-02Fix absolute imports in directionality measuresMario Mulansky
2018-06-02another python3 fixMario Mulansky
2018-06-02python3 fixesMario Mulansky
2018-06-02updated test case to new spike sync behaviorMario Mulansky
2018-06-02added coincidence single profile to python backendMario Mulansky
missing function in python backend added, identified and fixed a bug in the implementation as well
2018-06-02spike sync filtering, cython sim annMario Mulansky
Added function for filtering out events based on a threshold for the spike sync values. Usefull for focusing on synchronous events during directionality analysis. Also added cython version of simulated annealing for performance.
2018-06-02added SPIKE-Sync based filteringMario Mulansky
new function filter_by_spike_sync removes spikes that have a multi-variate Spike Sync value below some threshold not yet fully tested, python backend missing.
2018-06-02completed python directionality backendMario Mulansky
2018-06-02further refactoring of directionalityMario Mulansky
2018-06-02reorganized directionality moduleMario Mulansky
2018-02-10Merge pull request #32 from mariomulansky/remove-python33Mario Mulansky
Remove Python 3.3 from travis
2018-02-10Merge pull request #31 from jonathanjouty/masterMario Mulansky
Make merge_spike_trains work with empty spike trains, and faster
2018-02-07Remove Python 3.3 from travisMario Mulansky
Python 3.3 is not supported by scipy anymore. This removes Python 3.3 from the CI environments.
2018-02-04Make merge_spike_trains work with empty spike trains, and fasterJonathan Jouty
1. Fixes https://github.com/mariomulansky/PySpike/issues/30 2. Code is faster 3. Add test case
2017-10-05Merge pull request #28 from mariomulansky/masterMario Mulansky
Master back into develop
2017-10-04Version bumpMario Mulansky
2017-10-04Fix library status stringMario Mulansky
2017-10-04Fix typo in emailMario Mulansky
2017-10-04Merge branch 'master' of github.com:mariomulansky/PySpikeMario Mulansky
2017-10-04Update version in docs0.5.2Mario Mulansky
2017-10-04Merge pull request #27 from mariomulansky/developMario Mulansky
Merge v 0.5.2
2017-10-04defer numpy import to allow install_requires to do its job (fixes #24)Dan Meliza
2017-10-04Bump versionMario Mulansky
2017-10-04Remove Python2.6, add Python3.6 from/to CIMario Mulansky
2017-10-03Merge pull request #25 from melizalab/masterMario Mulansky
defer numpy import to allow install_requires to do its job (fixes #24)
2017-10-02defer numpy import to allow install_requires to do its job (fixes #24)Dan Meliza
2016-10-30fixed typoMario Mulansky
2016-10-30updated referencesMario Mulansky
2016-10-27Added SoftwareX reference and Spike-Order noteMario Mulansky
2016-06-19increased travis wait time for numeric testsMario Mulansky
2016-06-18added missing data files for testsMario Mulansky
2016-06-18Merge branch 'import_time_series' into developMario Mulansky
Conflicts: pyspike/__init__.py resolved
2016-06-18added function to import time seriesMario Mulansky
new function import_spike_trains_from_time_series that loads spike trains from time series.
2016-03-29another python3 fixMario Mulansky
2016-03-29python3 fixesMario Mulansky
2016-03-29updated test case to new spike sync behaviorMario Mulansky
2016-03-29Merge branch 'develop' into new_directionalityMario Mulansky