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Input filename:
/Users/uli/Bitbucket/phat-paper/benchmark/dipha/sphere_3_192.complex
upper_dim: 3
Number of processes used:
1
Detailed information for rank 0:
time prior mem peak mem bytes recv
0.0s 3 MB 4 MB 0 MB complex.load_binary( input_filename, upper_dim );
Number of cells in input:
56050288
12.3s 4 MB 1714 MB 0 MB get_filtration_to_cell_map( complex, dualize, filtration_to_cell_map );
5.5s 431 MB 4416 MB 855 MB get_cell_to_filtration_map( complex.get_num_cells(), filtration_to_cell_map, cell_to_filtration_map );
0.3s 2278 MB 4416 MB 0 MB generate_unreduced_columns( complex, filtration_to_cell_map, cell_to_filtration_map, cur_dim, dualize, unreduced_columns );
0.0s 2279 MB 4416 MB 0 MB reduction_kernel( complex.get_num_cells(), unreduced_columns, reduced_columns );
0.6s 2279 MB 4416 MB 53 MB generate_unreduced_columns( complex, filtration_to_cell_map, cell_to_filtration_map, cur_dim, dualize, unreduced_columns );
0.0s 2240 MB 4416 MB 0 MB reduction_kernel( complex.get_num_cells(), unreduced_columns, reduced_columns );
18.7s 2252 MB 5285 MB 3349 MB generate_unreduced_columns( complex, filtration_to_cell_map, cell_to_filtration_map, cur_dim, dualize, unreduced_columns );
5.9s 3930 MB 5715 MB 0 MB reduction_kernel( complex.get_num_cells(), unreduced_columns, reduced_columns );
6.8s 3716 MB 5715 MB 106 MB dipha::outputs::save_persistence_diagram( output_filename, complex, filtration_to_cell_map, reduced_columns, dualize, upper_dim );
Overall running time in seconds:
50.9
Reduction kernel running time in seconds:
5.9
Overall peak mem in GB of all ranks:
5.6
Individual peak mem in GB of per rank:
5.6
Maximal communication traffic (without sorting) in GB between any pair of nodes:
4.3
Total communication traffic (without sorting) in GB between all pairs of nodes:
4.3
50.97 real 42.99 user 7.93 sys
5993607168 maximum resident set size
0 average shared memory size
0 average unshared data size
0 average unshared stack size
5448458 page reclaims
0 page faults
0 swaps
0 block input operations
6 block output operations
0 messages sent
0 messages received
0 signals received
6 voluntary context switches
6625 involuntary context switches
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