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uli:dipha uli$ /usr/bin/time -l ~/Bitbucket/dipha/dipha --benchmark --upper_dim 3 --dual ~/Bitbucket/phat-paper/benchmark/dipha/sphere_3_64.complex /dev/null
Input filename:
/Users/uli/Bitbucket/phat-paper/benchmark/dipha/sphere_3_64.complex
upper_dim: 3
Number of processes used:
1
Detailed information for rank 0:
time prior mem peak mem bytes recv
0.0s 3 MB 3 MB 0 MB complex.load_binary( input_filename, upper_dim );
Number of cells in input:
679120
0.2s 3 MB 24 MB 0 MB get_filtration_to_cell_map( complex, dualize, filtration_to_cell_map );
0.1s 24 MB 69 MB 10 MB get_cell_to_filtration_map( complex.get_num_cells(), filtration_to_cell_map, cell_to_filtration_map );
0.0s 84 MB 85 MB 0 MB generate_unreduced_columns( complex, filtration_to_cell_map, cell_to_filtration_map, cur_dim, dualize, unreduced_columns );
0.0s 85 MB 85 MB 0 MB reduction_kernel( complex.get_num_cells(), unreduced_columns, reduced_columns );
0.0s 85 MB 88 MB 1 MB generate_unreduced_columns( complex, filtration_to_cell_map, cell_to_filtration_map, cur_dim, dualize, unreduced_columns );
0.0s 88 MB 89 MB 0 MB reduction_kernel( complex.get_num_cells(), unreduced_columns, reduced_columns );
0.3s 89 MB 122 MB 38 MB generate_unreduced_columns( complex, filtration_to_cell_map, cell_to_filtration_map, cur_dim, dualize, unreduced_columns );
0.1s 102 MB 142 MB 0 MB reduction_kernel( complex.get_num_cells(), unreduced_columns, reduced_columns );
0.1s 141 MB 142 MB 3 MB dipha::outputs::save_persistence_diagram( output_filename, complex, filtration_to_cell_map, reduced_columns, dualize, upper_dim );
Overall running time in seconds:
0.8
Reduction kernel running time in seconds:
0.1
Overall peak mem in GB of all ranks:
0.1
Individual peak mem in GB of per rank:
0.1
Maximal communication traffic (without sorting) in GB between any pair of nodes:
0.1
Total communication traffic (without sorting) in GB between all pairs of nodes:
0.1
0.81 real 0.65 user 0.13 sys
149577728 maximum resident set size
0 average shared memory size
0 average unshared data size
0 average unshared stack size
51467 page reclaims
0 page faults
0 swaps
0 block input operations
1 block output operations
0 messages sent
0 messages received
0 signals received
7 voluntary context switches
1069 involuntary context switches
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